PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn273861
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Nin-like
Protein Properties Length: 801aa    MW: 90534.6 Da    PI: 7.9613
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn273861genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK32.71.5e-102512772652
      RWP-RK  26 gvclTvLKriCRqyGIkRWPhRkiksl 52 
                  v+ ++ Kr CR+yGI+RWP R + ++
  Achn273861 251 SVSISTFKRVCRKYGINRWPPRNVDKV 277
                 4999*******************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS515199.955214297IPR003035RWP-RK domain
PfamPF020421.5E-7246277IPR003035RWP-RK domain
SuperFamilySSF542773.27E-18313406No hitNo description
SMARTSM006662.5E-15321404IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2403.9E-17321401No hitNo description
PfamPF005645.8E-16321402IPR000270PB1 domain
PROSITE profilePS5174525.046321404IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 801 aa     Download sequence    Send to blast
MAVLLKQEKN GNKYHKKAFM EMNRVLELLL KIYKLPLALT WAPCGACKTL LPVEDLYMDC  60
ADKTFVELHS FLMCMYGTPL RNGKGVLGRV LSSPNLLYCS DVTQFSMVEY PLAHFARECR  120
LRGCFAISLR NNYTGNDVYV LEIFMPTNNK DEDPLSSLSK ILETMKEFKN FTLASGEVLG  180
KELSVEVIEF QNGQKHHVQT LNVTGSLPSL EPLQNGGEIV QVDSSDHQSS DAEQCEIDGN  240
HPQELGTKKP SVSISTFKRV CRKYGINRWP PRNVDKVRPP PSHVDHQEEV PQLNSNLPSN  300
QASASIAHTQ PHDTVMQNAN TVNVKAKYGN DITIKFQLSL SSGLVELQQQ VAKRLNLEAG  360
SYHIKYKDEE DELILIACDE DLQDCIRTCR SPGSNAVILH IDPISQVYHT KSVTPVSYID  420
CFPASLRPYI RHVKDVAFDG NCGFRAIAGL MNIGEEDGWV QVRRDLLTEL NSHVDAYKSM  480
YEGQEMINEL THRLSWFDGC SGKDRWMTMP DMGHLIASCY NVVLYHLSHQ QCLTFLPLRS  540
VPIPAASRRE IAIGFVNNNH FVEGCPRPDR PDPTLKNTFG THDDADHVQE NNDLHPPDAQ  600
PNMKSRKWKV QGDVRSLMSS KTRKEDETDN KLPEGVATEE GRPIKKQVND RRRGNGNKFS  660
SEGKEERLKQ KLKPHQRGGN PEGQKPLRGE NKAVNARKLE EEVGSRKKKR TFQERIEQQK  720
ERKKAKKNKD PLGRDVVDKL DMLIEQYRSK FSQHISNKTD GEKQGASRVG DKERACDFPK  780
DKRDCTLQGD TVASTHKSDT *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247262KKPSVSISTFKRVCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-24NIN like protein 7